Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b | BK654_02975 | Not Available | Negative | 715961 - 716524 | 21624.9 |
| betaine-aldehyde dehydrogenase | BK654_02980 | Not Available | Negative | 716627 - 718081 | 51037.8 |
| aspartate aminotransferase family protein | BK654_02985 | Not Available | Negative | 718122 - 719498 | 49098.2 |
| arac family transcriptional regulator | BK654_02990 | Not Available | Positive | 719714 - 720676 | 36035.1 |
| transcriptional regulator | BK654_02995 | Not Available | Positive | 720737 - 721465 | 27177.0 |
| amino acid permease | BK654_03000 | Not Available | Positive | 721640 - 723088 | 51116.7 |
| short-chain dehydrogenase | BK654_03005 | Not Available | Negative | 723120 - 723899 | 27315.8 |
| hypothetical protein | BK654_03010 | Not Available | Negative | 724031 - 724276 | 8906.96 |
| lysr family transcriptional regulator | BK654_03015 | Not Available | Negative | 724609 - 725499 | 33120.1 |
| isomerase | BK654_03020 | Not Available | Positive | 725668 - 726750 | 37899.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
