Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metalloprotease | BK659_02330 | Not Available | Negative | 480465 - 481319 | 31346.5 |
| iclr family transcriptional regulator | BK659_02335 | Not Available | Positive | 481558 - 482334 | 28124.7 |
| eama family transporter | BK659_02340 | Not Available | Positive | 482487 - 483365 | 31657.1 |
| hypothetical protein | BK659_02345 | Not Available | Negative | 483415 - 484752 | 49096.1 |
| 4-hydroxyphenylpyruvate dioxygenase | BK659_02350 | Not Available | Positive | 485457 - 487361 | 70262.4 |
| tetr family transcriptional regulator | BK659_02355 | Not Available | Positive | 487463 - 488140 | 26274.5 |
| shikimate dehydrogenase | BK659_02360 | Not Available | Negative | 488200 - 489054 | 30092.4 |
| type ii 3-dehydroquinate dehydratase | BK659_02365 | Not Available | Negative | 489060 - 489500 | 15889.0 |
| lysr family transcriptional regulator | BK659_02370 | Not Available | Negative | 489653 - 490573 | 34315.1 |
| 4-oxalocrotonate tautomerase | BK659_02375 | Not Available | Positive | 490796 - 490999 | 7631.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
