Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit epsilon | BK659_02280 | Not Available | Positive | 470314 - 470925 | 22603.5 |
| drug/metabolite exporter yeda | BK659_02285 | Not Available | Positive | 471237 - 472163 | 32663.9 |
| dead/deah box helicase | BK659_02290 | Not Available | Positive | 472216 - 473550 | 48831.5 |
| nad(fad)-utilizing dehydrogenase | BK659_02295 | Not Available | Negative | 473705 - 474976 | 45063.9 |
| histone deacetylase | BK659_02300 | Not Available | Negative | 475222 - 476142 | 34195.7 |
| gnat family n-acetyltransferase | BK659_02305 | Not Available | Positive | 476220 - 476789 | 21326.5 |
| acyl-coa thioesterase ii | BK659_02310 | Not Available | Positive | 476886 - 477755 | 32451.4 |
| had family hydrolase | BK659_02315 | Not Available | Positive | 477752 - 478345 | 21482.7 |
| hypothetical protein | BK659_02320 | Not Available | Negative | 478463 - 479428 | 35689.3 |
| neutral zinc metallopeptidase | BK659_02325 | Not Available | Negative | 479429 - 480331 | 32349.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
