Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine abc transporter atp-binding protein | BK659_02230 | Not Available | Negative | 461271 - 462257 | 35659.6 |
| nickel abc transporter permease | BK659_02235 | Not Available | Negative | 462254 - 463108 | 30480.2 |
| abc transporter permease | BK659_02240 | Not Available | Negative | 463105 - 464052 | 34612.6 |
| proline iminopeptidase | BK659_02245 | Not Available | Negative | 464056 - 464943 | 33566.0 |
| luxr family transcriptional regulator | BK659_02250 | Not Available | Positive | 465125 - 465886 | 28015.7 |
| alpha/beta hydrolase | BK659_02255 | Not Available | Positive | 465976 - 466875 | 33549.8 |
| endonuclease | BK659_02260 | Not Available | Negative | 466901 - 467980 | 40684.5 |
| hypothetical protein | BK659_02265 | Not Available | Negative | 468054 - 468728 | 25064.6 |
| abc transporter substrate-binding protein | BK659_02270 | Not Available | Positive | 468906 - 469673 | 26838.4 |
| nuclease | BK659_02275 | Not Available | Positive | 469812 - 470291 | 17613.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
