Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp nucleosidase | BK659_02180 | Not Available | Positive | 450009 - 451472 | 54461.3 |
| pseudouridine synthase | BK659_02185 | Not Available | Positive | 451544 - 452185 | 23939.9 |
| hypothetical protein | BK659_02190 | Not Available | Negative | 452180 - 452389 | 7513.63 |
| asnc family transcriptional regulator | BK659_02195 | Not Available | Negative | 452607 - 453086 | 18069.9 |
| glycine zipper family protein | BK659_02200 | Not Available | Positive | 453509 - 454612 | 42222.4 |
| divalent metal cation transporter fief | BK659_02205 | Not Available | Negative | 454606 - 455502 | 32086.0 |
| polyribonucleotide nucleotidyltransferase | BK659_02210 | Not Available | Negative | 455531 - 455950 | 14857.2 |
| atp-dependent helicase hrpb | BK659_02215 | Not Available | Positive | 456060 - 458594 | 93276.4 |
| diguanylate cyclase | BK659_02220 | Not Available | Negative | 458754 - 460268 | 56132.7 |
| abc transporter atp-binding protein | BK659_02225 | Not Available | Negative | 460303 - 461274 | 35123.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
