Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rrna maturation rnase ybey | BK659_02130 | Not Available | Negative | 438052 - 438546 | 18581.6 |
| phoh family protein | BK659_02135 | Not Available | Negative | 438539 - 439558 | 38417.5 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | BK659_02140 | Not Available | Negative | 439785 - 441113 | 49457.9 |
| hypothetical protein | BK659_02145 | Not Available | Positive | 441249 - 441578 | 12572.3 |
| hypothetical protein | BK659_02150 | Not Available | Negative | 441707 - 442261 | 19973.8 |
| glutamate-1-semialdehyde-2,1-aminomutase | BK659_02155 | Not Available | Negative | 442489 - 443772 | 45178.4 |
| thiamine-phosphate diphosphorylase | BK659_02160 | Not Available | Negative | 443792 - 444415 | 22245.7 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | BK659_02165 | Not Available | Negative | 444434 - 445231 | 28345.0 |
| hybrid sensor histidine kinase/response regulator | BK659_02170 | Not Available | Positive | 445658 - 448042 | 87767.3 |
| dna alkylation response protein | BK659_02175 | Not Available | Positive | 448117 - 449766 | 59738.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
