Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ld-carboxypeptidase | BK659_02080 | Not Available | Positive | 426834 - 427784 | 34044.4 |
| murein transglycosylase | BK659_02085 | Not Available | Negative | 427914 - 429236 | 47764.5 |
| lipoyl synthase | BK659_02090 | Not Available | Negative | 429309 - 429464 | 5870.0 |
| dna polymerase iii subunit delta | BK659_02095 | Not Available | Negative | 429649 - 430686 | 37336.2 |
| hypothetical protein | BK659_02100 | Not Available | Negative | 430726 - 431331 | 22200.5 |
| leucine--trna ligase | BK659_02105 | Not Available | Negative | 431422 - 434028 | 97098.5 |
| hypothetical protein | BK659_02110 | Not Available | Positive | 434375 - 434695 | 12113.8 |
| hypothetical protein | BK659_02115 | Not Available | Positive | 434832 - 435593 | 28089.2 |
| apolipoprotein n-acyltransferase | BK659_02120 | Not Available | Negative | 435675 - 437198 | 55925.5 |
| magnesium/cobalt efflux protein | BK659_02125 | Not Available | Negative | 437207 - 438046 | 31436.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
