Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome silencing factor | BK659_02030 | Not Available | Positive | 417225 - 417719 | 18123.8 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | BK659_02035 | Not Available | Positive | 417729 - 418196 | 17707.5 |
| penicillin-binding protein 2 | BK659_02040 | Not Available | Positive | 418209 - 420104 | 70218.4 |
| rod shape-determining protein roda | BK659_02045 | Not Available | Positive | 420136 - 421239 | 40133.8 |
| lytic murein transglycosylase b | BK659_02050 | Not Available | Positive | 421257 - 422267 | 37778.8 |
| hypothetical protein | BK659_02055 | Not Available | Positive | 422267 - 423277 | 36239.3 |
| serine-type d-ala-d-ala carboxypeptidase | BK659_02060 | Not Available | Positive | 423469 - 424626 | 42062.7 |
| hypothetical protein | BK659_02065 | Not Available | Positive | 424708 - 424983 | 10129.2 |
| octanoyltransferase | BK659_02070 | Not Available | Positive | 424983 - 425630 | 23628.5 |
| lipoyl synthase | BK659_02075 | Not Available | Positive | 425632 - 426660 | 38306.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
