Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n utilization substance protein b | BK659_01830 | Not Available | Positive | 371631 - 372131 | 18783.3 |
| thiamine-phosphate kinase | BK659_01835 | Not Available | Positive | 372140 - 373105 | 32726.4 |
| phosphatidylglycerophosphatase a | BK659_01840 | Not Available | Positive | 373102 - 373605 | 19297.8 |
| abc transporter substrate-binding protein | BK659_01845 | Not Available | Positive | 373629 - 374366 | 28172.6 |
| gtp cyclohydrolase ii | BK659_01850 | Not Available | Positive | 374655 - 375272 | 22300.9 |
| mfs transporter | BK659_01855 | Not Available | Positive | 375269 - 375688 | 15288.3 |
| cobalamin-binding protein | BK659_01860 | Not Available | Positive | 375688 - 376485 | 28931.3 |
| tonb-dependent receptor | BK659_01865 | Not Available | Negative | 376606 - 378489 | 70321.2 |
| 1-deoxy-d-xylulose-5-phosphate synthase | BK659_01870 | Not Available | Negative | 378640 - 380538 | 68368.6 |
| geranyl transferase | BK659_01875 | Not Available | Negative | 380649 - 381536 | 31460.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
