Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-binding protein | BK659_01780 | Not Available | Negative | 363997 - 364608 | 21716.4 |
| hypothetical protein | BK659_01785 | Not Available | Positive | 364743 - 365102 | 13088.6 |
| thioredoxin | BK659_01790 | Not Available | Negative | 365201 - 366073 | 32029.2 |
| protein methyltransferase | BK659_01795 | Not Available | Negative | 366255 - 366911 | 24297.0 |
| hypothetical protein | BK659_01800 | Not Available | Negative | 366908 - 367369 | 16258.0 |
| transcriptional regulator nrdr | BK659_01805 | Not Available | Positive | 367498 - 367962 | 17903.6 |
| riboflavin biosynthesis protein ribd | BK659_01810 | Not Available | Positive | 367959 - 369089 | 40269.6 |
| riboflavin synthase subunit alpha | BK659_01815 | Not Available | Positive | 369281 - 369943 | 23302.9 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | BK659_01820 | Not Available | Positive | 369975 - 371066 | 39439.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | BK659_01825 | Not Available | Positive | 371158 - 371634 | 16419.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
