Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK659_01730 | Not Available | Negative | 351102 - 351779 | 24955.8 |
| cysteine hydrolase | BK659_01735 | Not Available | Negative | 351945 - 352499 | 19926.6 |
| arac family transcriptional regulator | BK659_01740 | Not Available | Positive | 352598 - 353587 | 35356.3 |
| atp-dependent dna helicase | BK659_01745 | Not Available | Negative | 353824 - 358146 | 158716.0 |
| dtdp-4-dehydrorhamnose reductase | BK659_01750 | Not Available | Positive | 358435 - 359319 | 32517.9 |
| nad-dependent dehydratase | BK659_01755 | Not Available | Positive | 359312 - 360241 | 33226.5 |
| outer membrane protein ompw | BK659_01760 | Not Available | Negative | 360424 - 361122 | 24854.7 |
| hypothetical protein | BK659_01765 | Not Available | Negative | 361355 - 361873 | 18705.7 |
| peptide abc transporter permease | BK659_01770 | Not Available | Negative | 361885 - 363150 | 45830.1 |
| methionine abc transporter atp-binding protein | BK659_01775 | Not Available | Negative | 363152 - 363862 | 25829.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
