Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l30 | BK659_01630 | Not Available | Positive | 333964 - 334140 | 6511.26 |
| 50s ribosomal protein l15 | BK659_01635 | Not Available | Positive | 334144 - 334581 | 15195.4 |
| preprotein translocase subunit secy | BK659_01640 | Not Available | Positive | 334582 - 335910 | 47823.6 |
| 50s ribosomal protein l36 | BK659_01645 | Not Available | Positive | 335935 - 336051 | 4434.66 |
| 30s ribosomal protein s13 | BK659_01650 | Not Available | Positive | 336182 - 336538 | 13340.5 |
| 30s ribosomal protein s11 | BK659_01655 | Not Available | Positive | 336569 - 336958 | 13616.4 |
| 30s ribosomal protein s4 | BK659_01660 | Not Available | Positive | 336977 - 337597 | 23077.7 |
| dna-directed rna polymerase subunit alpha | BK659_01665 | Not Available | Positive | 337620 - 338621 | 36645.9 |
| 50s ribosomal protein l17 | BK659_01670 | Not Available | Positive | 338664 - 339050 | 14400.6 |
| catalase | BK659_01675 | Not Available | Positive | 339279 - 340727 | 53632.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
