Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK659_01330 | Not Available | Negative | 273236 - 282772 | 321050.0 |
| channel protein tolc | BK659_01335 | Not Available | Positive | 283617 - 284981 | 50658.4 |
| abc transporter | BK659_01340 | Not Available | Positive | 285000 - 287159 | 78634.5 |
| hemolysin secretion protein d | BK659_01345 | Not Available | Positive | 287169 - 288524 | 49490.5 |
| dtw domain-containing protein | BK659_01350 | Not Available | Negative | 288539 - 289132 | 21506.3 |
| lysr family transcriptional regulator | BK659_01355 | Not Available | Negative | 289146 - 290039 | 33231.1 |
| agmatinase | BK659_01360 | Not Available | Positive | 290413 - 291363 | 34249.4 |
| duf4440 domain-containing protein | BK659_01365 | Not Available | Positive | 291373 - 291795 | 15823.3 |
| nitrate reductase | BK659_01370 | Not Available | Positive | 291851 - 293362 | 53543.9 |
| sodium:solute symporter | BK659_01375 | Not Available | Positive | 293501 - 294880 | 48883.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
