Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| motility accessory factor maf-2 | BK659_01030 | Not Available | Negative | 205653 - 206945 | 48351.6 |
| 3-oxoacyl-acp synthase | BK659_01035 | Not Available | Negative | 207025 - 207951 | 33087.6 |
| pseudaminic acid synthase | BK659_01040 | Not Available | Negative | 208169 - 209221 | 37897.4 |
| udp-2,4-diacetamido-2,4, 6-trideoxy-beta-l-altropyranose hydrolase | BK659_01045 | Not Available | Negative | 209214 - 210719 | 55188.9 |
| pseudaminic acid cytidylyltransferase | BK659_01050 | Not Available | Negative | 210716 - 211423 | 25935.7 |
| pseudaminic acid biosynthesis-associated methylase | BK659_01055 | Not Available | Negative | 211420 - 212040 | 23524.0 |
| udp-4-amino-4, 6-dideoxy-n-acetyl-beta-l-altrosamine transaminase | BK659_01060 | Not Available | Negative | 212191 - 213360 | 42936.5 |
| glycosyl transferase family 2 | BK659_01065 | Not Available | Negative | 213471 - 216401 | 109059.0 |
| cephalosporin hydroxylase | BK659_01070 | Not Available | Negative | 216457 - 217185 | 27599.1 |
| transferase | BK659_01075 | Not Available | Negative | 217211 - 217876 | 23441.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
