Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-basal body complex protein flie | BK659_00980 | Not Available | Negative | 196551 - 196880 | 11850.4 |
| sigma-54-dependent fis family transcriptional regulator | BK659_00985 | Not Available | Negative | 197106 - 198506 | 50619.5 |
| pas domain-containing sensor histidine kinase | BK659_00990 | Not Available | Negative | 198512 - 199735 | 44395.4 |
| sigma-54-dependent fis family transcriptional regulator | BK659_00995 | Not Available | Negative | 199845 - 201320 | 55364.6 |
| flagellar protein flit | BK659_01000 | Not Available | Negative | 201491 - 201787 | 11079.1 |
| flagellar export chaperone flis | BK659_01005 | Not Available | Negative | 201798 - 202193 | 14252.4 |
| flagellar hook protein flid | BK659_01010 | Not Available | Negative | 202324 - 203769 | 48281.0 |
| flagellar biosynthesis protein flag | BK659_01015 | Not Available | Negative | 203853 - 204209 | 12441.6 |
| flagellin | BK659_01020 | Not Available | Negative | 204283 - 205134 | 28897.9 |
| hypothetical protein | BK659_01025 | Not Available | Negative | 205384 - 205656 | 10176.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
