Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta (1-6) glucans synthase | BK659_00640 | Not Available | Positive | 126251 - 127846 | 58599.3 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 126511 - 126864 | Not Available |
| hypothetical protein | BK659_00645 | Not Available | Negative | 127974 - 128342 | 13285.8 |
| serine/threonine protein kinase | BK659_00650 | Not Available | Positive | 128566 - 129864 | 48580.1 |
| abc transporter | BK659_00655 | Not Available | Positive | 129857 - 130645 | 29585.2 |
| hypothetical protein | BK659_00660 | Not Available | Negative | 130853 - 131767 | 31387.2 |
| rnd transporter | BK659_00665 | Not Available | Negative | 131840 - 133237 | 49347.0 |
| multidrug transporter subunit mdtc | BK659_00670 | Not Available | Negative | 133387 - 136503 | 110582.0 |
| multidrug transporter subunit mdtc | BK659_00675 | Not Available | Negative | 136509 - 139574 | 109938.0 |
| efflux transporter periplasmic adaptor subunit | BK659_00680 | Not Available | Negative | 139588 - 140715 | 39518.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
