Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoamide succinyltransferase | BK659_00590 | Not Available | Negative | 113339 - 114556 | 42028.8 |
| 2-oxoglutarate dehydrogenase e1 component | BK659_00595 | Not Available | Negative | 114599 - 117430 | 106359.0 |
| succinate dehydrogenase iron-sulfur subunit | BK659_00600 | Not Available | Negative | 117693 - 118397 | 26081.6 |
| succinate dehydrogenase flavoprotein subunit | BK659_00605 | Not Available | Negative | 118409 - 120184 | 63692.8 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | BK659_00610 | Not Available | Negative | 120188 - 120556 | 13622.9 |
| succinate dehydrogenase, cytochrome b556 subunit | BK659_00615 | Not Available | Negative | 120550 - 120924 | 13295.9 |
| citrate (si)-synthase | BK659_00620 | Not Available | Positive | 121287 - 122576 | 47744.9 |
| cation acetate symporter | BK659_00625 | Not Available | Negative | 122918 - 124576 | 58660.1 |
| hypothetical protein | BK659_00630 | Not Available | Negative | 124573 - 124884 | 11397.0 |
| glycine/betaine abc transporter substrate-binding protein | BK659_00635 | Not Available | Negative | 125111 - 125962 | 30655.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
