Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK659_00400 | Not Available | Positive | 71246 - 72004 | 28400.6 |
| methyl-accepting chemotaxis protein | BK659_00405 | Not Available | Negative | 72098 - 74065 | 69415.6 |
| gntr family transcriptional regulator | BK659_00410 | Not Available | Negative | 74197 - 75603 | 51034.5 |
| short chain dehydrogenase | BK659_00415 | Not Available | Negative | 75831 - 76592 | 26044.5 |
| nadp-dependent oxidoreductase | BK659_00420 | Not Available | Positive | 76825 - 77829 | 35549.3 |
| orotidine 5'-phosphate decarboxylase | BK659_00425 | Not Available | Negative | 77965 - 78699 | 26070.8 |
| dna-binding response regulator | BK659_00430 | Not Available | Positive | 78969 - 79733 | 28916.9 |
| two-component sensor histidine kinase | BK659_00435 | Not Available | Positive | 79733 - 80770 | 38361.4 |
| histidine kinase | BK659_00440 | Not Available | Positive | 80884 - 81672 | 26764.2 |
| ai-2e family transporter | BK659_00445 | Not Available | Negative | 81775 - 82827 | 37925.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
