Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretin | BK659_00300 | Not Available | Positive | 56342 - 57583 | 43746.6 |
| hypothetical protein | BK659_00305 | Not Available | Positive | 57619 - 58329 | 25256.3 |
| hypothetical protein | BK659_00310 | Not Available | Positive | 58348 - 58617 | 10005.1 |
| type ii secretion system protein | BK659_00315 | Not Available | Negative | 58813 - 59775 | 34497.2 |
| secretion system protein | BK659_00320 | Not Available | Negative | 59805 - 60791 | 36860.5 |
| pilus assembly protein cpaf | BK659_00325 | Not Available | Negative | 60788 - 62230 | 53273.4 |
| hypothetical protein | BK659_00330 | Not Available | Negative | 62234 - 63454 | 44084.5 |
| hypothetical protein | BK659_00335 | Not Available | Negative | 63448 - 63942 | 17787.7 |
| pilus assembly protein tadg | BK659_00340 | Not Available | Negative | 63942 - 64427 | 16936.9 |
| pilus assembly protein | BK659_00345 | Not Available | Negative | 64436 - 65770 | 45181.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
