Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | BK659_00245 | Not Available | Positive | 45686 - 48133 | 88858.0 |
| dehydrogenase | BK659_00250 | Not Available | Positive | 48229 - 48627 | 15500.2 |
| transcriptional regulator | BK659_00255 | Not Available | Negative | 48920 - 49918 | 36977.9 |
| hypothetical protein | BK659_00260 | Not Available | Positive | 50009 - 50635 | 23129.6 |
| hypothetical protein | BK659_00265 | Not Available | Positive | 50740 - 51510 | 28535.1 |
| lysine transporter lyse | BK659_00270 | Not Available | Positive | 51512 - 52150 | 23158.1 |
| histidine/lysine/arginine/ornithine abc transporter atp-binding protein | BK659_00275 | Not Available | Negative | 52268 - 53032 | 28285.3 |
| amino acid abc transporter permease | BK659_00280 | Not Available | Negative | 53110 - 53820 | 26599.8 |
| amino acid abc transporter permease | BK659_00285 | Not Available | Negative | 53817 - 54545 | 26681.3 |
| abc transporter substrate-binding protein | BK659_00290 | Not Available | Negative | 54603 - 55382 | 27714.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
