Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s49 family peptidase | BK659_00145 | Not Available | Negative | 24314 - 25303 | 35831.7 |
| had family hydrolase | BK659_00150 | Not Available | Negative | 25325 - 25990 | 24528.1 |
| 23s rrna pseudouridine(955/2504/2580) synthase | BK659_00155 | Not Available | Negative | 25977 - 26939 | 35777.8 |
| ribonuclease e | BK659_00160 | Not Available | Positive | 27680 - 30847 | 115899.0 |
| molybdopterin-guanine dinucleotide biosynthesis protein moba | BK659_00165 | Not Available | Negative | 31045 - 31644 | 20704.3 |
| acylaldehyde oxidase | BK659_00170 | Not Available | Negative | 31644 - 33959 | 83463.9 |
| (2fe-2s)-binding protein | BK659_00175 | Not Available | Negative | 33956 - 34426 | 16576.9 |
| udp-n-acetylenolpyruvoylglucosamine reductase | BK659_00180 | Not Available | Negative | 34563 - 35582 | 37115.6 |
| protein-tyrosine-phosphatase | BK659_00185 | Not Available | Negative | 35579 - 36043 | 17215.5 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | BK659_00190 | Not Available | Negative | 36043 - 36819 | 28255.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
