Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proteophosphoglycan precursor | BK659_00050 | Not Available | Negative | 8725 - 9285 | 20847.1 |
| duf4823 domain-containing protein | BK659_00055 | Not Available | Negative | 9303 - 9908 | 22098.4 |
| radical sam protein | BK659_00060 | Not Available | Negative | 10142 - 11110 | 35129.9 |
| tetr family transcriptional regulator | BK659_00065 | Not Available | Negative | 11251 - 11889 | 25018.0 |
| class v aminotransferase | BK659_00070 | Not Available | Positive | 11969 - 13102 | 41573.9 |
| hydrolase tatd | BK659_00075 | Not Available | Negative | 13342 - 14130 | 28957.4 |
| pilus assembly protein pilz | BK659_00080 | Not Available | Negative | 14143 - 14499 | 12878.6 |
| dna polymerase iii subunit delta' | BK659_00085 | Not Available | Negative | 14542 - 15528 | 36388.3 |
| dtmp kinase | BK659_00090 | Not Available | Negative | 15521 - 16153 | 23187.0 |
| aminodeoxychorismate lyase | BK659_00095 | Not Available | Negative | 16173 - 17351 | 43086.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
