Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | BK659_00005 | Not Available | Negative | 212 - 1102 | 32528.7 |
| hydroxyacid dehydrogenase | BK659_00010 | Not Available | Positive | 1283 - 2335 | 37604.4 |
| transcriptional regulator | BK659_00015 | Not Available | Negative | 2348 - 3142 | 29074.2 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 3236 - 4782 | Not Available |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | BK659_00020 | Not Available | Negative | 3203 - 3832 | 21705.7 |
| 2-dehydro-3-deoxygalactonokinase | BK659_00025 | Not Available | Negative | 3842 - 4843 | 35410.5 |
| gnat family n-acetyltransferase | BK659_00030 | Not Available | Negative | 5066 - 5548 | 17953.2 |
| phosphohydrolase | BK659_00035 | Not Available | Positive | 5671 - 6336 | 24548.4 |
| mfs transporter | BK659_00040 | Not Available | Positive | 6449 - 7669 | 42419.6 |
| alpha/beta hydrolase | BK659_00045 | Not Available | Positive | 7789 - 8661 | 31598.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
