Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Lysozyme | BK659_25070 | Not Available | Negative | 5631965 - 5632501 | 18919.6 |
| Glycoside hydrolase family 19 protein | BK659_25075 | Not Available | Negative | 5632483 - 5633046 | 20909.9 |
| Bacteriophage side tail fiber assembly factor & structural component | BK659_25080 | Not Available | Negative | 5633062 - 5633670 | 22608.7 |
| Gp18 | BK659_25085 | Not Available | Negative | 5633678 - 5634769 | 38484.8 |
| Tail protein | BK659_25090 | Not Available | Negative | 5634792 - 5635232 | 16473.4 |
| Putative tail fiber protein | BK659_25095 | Not Available | Negative | 5635245 - 5636456 | 43552.2 |
| Tail protein | BK659_25100 | Not Available | Negative | 5636468 - 5637067 | 22332.6 |
| Tail protein | BK659_25105 | Not Available | Negative | 5637055 - 5638095 | 36509.4 |
| Putative tail protein | BK659_25110 | Not Available | Negative | 5638085 - 5638483 | 15516.2 |
| Putative baseplate assembly protein | BK659_25115 | Not Available | Negative | 5638483 - 5638992 | 17859.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
