Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | BK654_30080 | Not Available | Negative | 6919552 - 6921684 | 77692.4 |
| arac family transcriptional regulator | BK654_30085 | Not Available | Negative | 6922076 - 6922933 | 31473.2 |
| hypothetical protein | BK654_30090 | Not Available | Positive | 6923085 - 6923477 | 15006.1 |
| hypothetical protein | BK654_30095 | Not Available | Negative | 6923529 - 6923744 | 8252.57 |
| is481 family transposase | BK654_30100 | Not Available | Positive | 6923859 - 6925034 | 44893.1 |
| urease accessory protein uree | BK654_30230 | Not Available | Negative | 6976334 - 6976687 | 12803.1 |
| Hypothetical protein | BK659_25050 | Not Available | Positive | 5628609 - 5629727 | 42345.6 |
| recombination regulator recx | BK659_25055 | Not Available | Negative | 5629770 - 5630237 | 17944.5 |
| Dna strand exchange and recombination protein with protease and nuclease activity | BK659_25060 | Not Available | Negative | 5630246 - 5631298 | 37289.0 |
| damage-inducible protein cina | BK659_25065 | Not Available | Negative | 5631382 - 5631882 | 17669.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
