Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter small permease protein | BK654_29975 | Not Available | Negative | 6900062 - 6900589 | 19264.4 |
| c4-dicarboxylate abc transporter | BK654_29980 | Not Available | Negative | 6900665 - 6901633 | 35348.0 |
| gluconolactonase | BK654_29985 | Not Available | Negative | 6901690 - 6902595 | 32694.4 |
| nad-dependent dehydratase | BK654_29990 | Not Available | Negative | 6902639 - 6903460 | 30229.8 |
| hypothetical protein | BK654_29995 | Not Available | Negative | 6903606 - 6903821 | 8214.51 |
| transcriptional regulator | BK654_30005 | Not Available | Positive | 6904315 - 6905019 | 26616.4 |
| two-component system response regulator | BK654_30010 | Not Available | Positive | 6905339 - 6906025 | 24793.6 |
| two-component sensor histidine kinase | BK654_30015 | Not Available | Positive | 6905994 - 6907367 | 50526.7 |
| abc transporter substrate-binding protein | BK654_30020 | Not Available | Negative | 6907392 - 6908681 | 47310.8 |
| transcriptional regulator | BK654_30025 | Not Available | Negative | 6909202 - 6910227 | 36847.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
