Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama family transporter | BK654_29920 | Not Available | Positive | 6887684 - 6888613 | 32990.3 |
| branched chain amino acid aminotransferase | BK654_29925 | Not Available | Negative | 6888697 - 6889716 | 36979.2 |
| dihydrolipoyl dehydrogenase | BK654_29930 | Not Available | Negative | 6889974 - 6891359 | 48544.7 |
| branched-chain alpha-keto acid dehydrogenase subunit e2 | BK654_29935 | Not Available | Negative | 6891363 - 6892634 | 45233.8 |
| alpha-ketoacid dehydrogenase subunit beta | BK654_29940 | Not Available | Negative | 6892635 - 6893693 | 38531.9 |
| arsr family transcriptional regulator | BK654_29950 | Not Available | Positive | 6895130 - 6895618 | 18241.3 |
| mbl fold metallo-hydrolase | BK654_29955 | Not Available | Negative | 6895764 - 6896627 | 31549.5 |
| hypothetical protein | BK654_29960 | Not Available | Positive | 6896833 - 6897633 | 27391.9 |
| aldose epimerase | BK654_29965 | Not Available | Negative | 6897669 - 6898538 | 32002.3 |
| hypothetical protein | BK654_29970 | Not Available | Negative | 6898782 - 6900062 | 45314.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
