Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 6875529 - 6875604 | Not Available |
| histidine kinase | BK654_29875 | Not Available | Positive | 6879189 - 6881267 | 74842.1 |
| dna alkylation repair protein | BK654_29880 | Not Available | Negative | 6881274 - 6882377 | 41192.7 |
| hypothetical protein | BK654_29885 | Not Available | Positive | 6882517 - 6882825 | 11332.6 |
| hypothetical protein | BK654_29890 | Not Available | Negative | 6882830 - 6883153 | 12047.3 |
| peptidase m4 family protein | BK654_29895 | Not Available | Negative | 6883153 - 6884211 | 38473.9 |
| peptidylprolyl isomerase | BK654_29900 | Not Available | Positive | 6884390 - 6884731 | 12527.1 |
| cytochrome | BK654_29905 | Not Available | Negative | 6884745 - 6885866 | 40323.5 |
| transcriptional regulator | BK654_29910 | Not Available | Positive | 6885949 - 6886704 | 27074.8 |
| arac family transcriptional regulator | BK654_29915 | Not Available | Negative | 6886783 - 6887574 | 29496.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
