Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK654_29650 | Not Available | Positive | 6822418 - 6823179 | 26557.7 |
| oxidoreductase | BK654_29655 | Not Available | Positive | 6823557 - 6825110 | 55783.3 |
| hypothetical protein | BK654_29660 | Not Available | Positive | 6825266 - 6825679 | 14474.1 |
| lysr family transcriptional regulator | BK654_29665 | Not Available | Negative | 6825874 - 6826800 | 34034.9 |
| polyketide cyclase | BK654_29670 | Not Available | Positive | 6826914 - 6827243 | 11914.0 |
| short-chain dehydrogenase | BK654_29675 | Not Available | Positive | 6827240 - 6828016 | 27112.8 |
| phosphoribosyltransferase | BK654_29680 | Not Available | Positive | 6828247 - 6829203 | 35206.1 |
| hypothetical protein | BK654_29685 | Not Available | Negative | 6829188 - 6830672 | 54732.5 |
| excinuclease abc subunit a | BK654_29690 | Not Available | Positive | 6830866 - 6833517 | 96048.3 |
| hypothetical protein | BK654_29695 | Not Available | Positive | 6833950 - 6834633 | 25924.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
