Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | BK654_29600 | Not Available | Negative | 6812602 - 6813423 | 29752.3 |
| esci/ysci/hrpb family type iii secretion system inner rod protein | BK654_29605 | Not Available | Negative | 6813413 - 6813769 | 12615.9 |
| hypothetical protein | BK654_29610 | Not Available | Negative | 6813822 - 6814568 | 25808.4 |
| hypothetical protein | BK654_29615 | Not Available | Negative | 6814766 - 6815119 | 11924.9 |
| aaa family atpase | BK654_29620 | Not Available | Negative | 6815151 - 6816128 | 35505.2 |
| hypothetical protein | BK654_29625 | Not Available | Positive | 6816728 - 6817171 | 16398.5 |
| hypothetical protein | BK654_29630 | Not Available | Positive | 6817513 - 6819222 | 60230.4 |
| transketolase | BK654_29635 | Not Available | Negative | 6819316 - 6819780 | 16871.5 |
| hypothetical protein | BK654_29640 | Not Available | Negative | 6819983 - 6820534 | 19885.7 |
| phosphohydrolase | BK654_29645 | Not Available | Negative | 6820870 - 6822303 | 51422.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
