Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escv/yscv/hrcv family type iii secretion system export apparatus protein | BK654_29500 | Not Available | Positive | 6796267 - 6798366 | 77241.8 |
| hypothetical protein | BK654_29505 | Not Available | Positive | 6798384 - 6799343 | 34209.8 |
| flagellum-specific atp synthase flii | BK654_29510 | Not Available | Positive | 6799340 - 6800689 | 48210.3 |
| type iii secretion protein | BK654_29515 | Not Available | Positive | 6800692 - 6801135 | 17272.5 |
| hypothetical protein | BK654_29520 | Not Available | Positive | 6801143 - 6801703 | 20034.7 |
| hypothetical protein | BK654_29525 | Not Available | Positive | 6801700 - 6802422 | 26615.4 |
| hypothetical protein | BK654_29530 | Not Available | Positive | 6802412 - 6802792 | 13497.6 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | BK654_29535 | Not Available | Positive | 6802789 - 6803442 | 23904.2 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | BK654_29540 | Not Available | Positive | 6803450 - 6803716 | 9336.94 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | BK654_29545 | Not Available | Positive | 6803716 - 6804510 | 28825.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
