Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK654_29400 | Not Available | Negative | 6767880 - 6768830 | 35854.4 |
| hypothetical protein | BK654_29405 | Not Available | Negative | 6768834 - 6770243 | 52346.8 |
| ligand-gated channel | BK654_29410 | Not Available | Negative | 6770780 - 6772906 | 77894.9 |
| chemotaxis protein | BK654_29415 | Not Available | Positive | 6773225 - 6775021 | 65613.2 |
| doxx family protein | BK654_29420 | Not Available | Positive | 6775189 - 6775704 | 18746.0 |
| thiamine pyrophosphate-requiring protein | BK654_29425 | Not Available | Positive | 6775882 - 6777681 | 65665.2 |
| hypothetical protein | BK654_29430 | Not Available | Positive | 6777694 - 6778374 | 25399.1 |
| bifunctional diguanylate cyclase/phosphodiesterase | BK654_29435 | Not Available | Positive | 6778613 - 6781186 | 94521.8 |
| nosl protein | BK654_29440 | Not Available | Negative | 6781258 - 6781785 | 18633.4 |
| hypothetical protein | BK654_29445 | Not Available | Negative | 6781816 - 6782646 | 29657.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
