Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug transporter subunit mdtc | BK654_29350 | Not Available | Negative | 6756164 - 6759259 | 111206.0 |
| efflux transporter periplasmic adaptor subunit | BK654_29355 | Not Available | Negative | 6759256 - 6760569 | 46630.6 |
| lipid hydroperoxide peroxidase | BK654_29360 | Not Available | Negative | 6760747 - 6761247 | 17526.9 |
| hypothetical protein | BK654_29365 | Not Available | Negative | 6761345 - 6762016 | 23737.5 |
| hypothetical protein | BK654_29370 | Not Available | Positive | 6762280 - 6763662 | 50526.4 |
| halovibrin hvnc | BK654_29375 | Not Available | Positive | 6763735 - 6764658 | 33421.8 |
| halovibrin hvnc | BK654_29380 | Not Available | Positive | 6764679 - 6765638 | 35293.9 |
| hypothetical protein | BK654_29385 | Not Available | Negative | 6765674 - 6766174 | 18239.8 |
| gnat family n-acetyltransferase | BK654_29390 | Not Available | Negative | 6766273 - 6766770 | 18576.4 |
| transglutaminase | BK654_29395 | Not Available | Negative | 6767086 - 6767883 | 29457.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
