Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | BK654_29200 | Not Available | Negative | 6726801 - 6727913 | 38860.6 |
| band 7 protein | BK654_29205 | Not Available | Positive | 6728314 - 6729204 | 32329.6 |
| histidine kinase | BK654_29210 | Not Available | Positive | 6729478 - 6731274 | 66979.8 |
| duf2188 domain-containing protein | BK654_29215 | Not Available | Negative | 6731317 - 6731508 | 6805.14 |
| polysaccharide deacetylase | BK654_29220 | Not Available | Negative | 6731615 - 6732514 | 33327.6 |
| hypothetical protein | BK654_29225 | Not Available | Positive | 6732709 - 6732963 | 9432.35 |
| hypothetical protein | BK654_29230 | Not Available | Positive | 6733115 - 6733345 | 8551.27 |
| hypothetical protein | BK654_29235 | Not Available | Positive | 6733467 - 6733892 | 15295.7 |
| hypothetical protein | BK654_29240 | Not Available | Negative | 6733920 - 6734147 | 8001.0 |
| hypothetical protein | BK654_29245 | Not Available | Negative | 6734232 - 6734417 | 7148.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
