Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK654_29150 | Not Available | Positive | 6712332 - 6713660 | 48080.8 |
| hypothetical protein | BK654_29155 | Not Available | Positive | 6713784 - 6714584 | 30547.5 |
| autotransporter outer membrane beta-barrel domain-containing protein | BK654_29160 | Not Available | Positive | 6714764 - 6717187 | 83861.7 |
| autotransporter outer membrane beta-barrel domain-containing protein | BK654_29165 | Not Available | Positive | 6717481 - 6718395 | 32445.9 |
| nadp-dependent glyceraldehyde-3-phosphate dehydrogenase | BK654_29170 | Not Available | Positive | 6718647 - 6720272 | 59697.6 |
| eama family transporter | BK654_29175 | Not Available | Negative | 6720291 - 6721184 | 31765.9 |
| asnc family transcriptional regulator | BK654_29180 | Not Available | Positive | 6721318 - 6721755 | 16349.0 |
| bax inhibitor protein | BK654_29185 | Not Available | Negative | 6722032 - 6722703 | 24372.1 |
| Trna-ser | Not Available | Not Available | Positive | 6722828 - 6722915 | Not Available |
| histidine kinase | BK654_29195 | Not Available | Negative | 6723062 - 6726778 | 131716.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
