Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain fatty acid transport protein | BK654_29100 | Not Available | Negative | 6698696 - 6699967 | 45586.1 |
| acyl-coa thioesterase | BK654_29105 | Not Available | Negative | 6700019 - 6700798 | 28007.4 |
| tetr family transcriptional regulator | BK654_29110 | Not Available | Negative | 6700975 - 6701595 | 23024.5 |
| amino acid abc transporter substrate-binding protein | BK654_29115 | Not Available | Positive | 6701940 - 6702704 | 28579.8 |
| efflux transporter periplasmic adaptor subunit | BK654_29120 | Not Available | Positive | 6702903 - 6704156 | 44597.1 |
| multidrug efflux rnd transporter permease subunit | BK654_29125 | Not Available | Positive | 6704172 - 6707351 | 114837.0 |
| rnd transporter | BK654_29130 | Not Available | Positive | 6707348 - 6708769 | 51434.8 |
| transcriptional regulator fear | BK654_29135 | Not Available | Negative | 6708889 - 6709851 | 35206.4 |
| hypothetical protein | BK654_29140 | Not Available | Negative | 6709975 - 6710595 | 22883.9 |
| apc family amino acid permease | BK654_29145 | Not Available | Negative | 6710540 - 6712039 | 53078.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
