Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dehydrogenase | BK654_29050 | Not Available | Negative | 6685578 - 6686003 | 15816.0 |
| ornithine cyclodeaminase | BK654_29055 | Not Available | Negative | 6686240 - 6687304 | 39074.7 |
| amino acid transporter | BK654_29060 | Not Available | Negative | 6687334 - 6688734 | 50489.0 |
| acetylpolyamine amidohydrolase | BK654_29065 | Not Available | Negative | 6688833 - 6689864 | 37190.7 |
| asnc family transcriptional regulator | BK654_29070 | Not Available | Positive | 6689989 - 6690474 | 17986.8 |
| beta-ketoacyl-acp synthase ii | BK654_29075 | Not Available | Negative | 6690577 - 6691863 | 44040.3 |
| mfs transporter | BK654_29080 | Not Available | Negative | 6691920 - 6695000 | 111887.0 |
| efflux transporter periplasmic adaptor subunit | BK654_29085 | Not Available | Negative | 6694997 - 6696106 | 38353.8 |
| rnd transporter | BK654_29090 | Not Available | Positive | 6696316 - 6697776 | 51242.5 |
| short-chain dehydrogenase | BK654_29095 | Not Available | Positive | 6697843 - 6698628 | 28692.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
