Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | BK654_28990 | Not Available | Positive | 6665445 - 6666023 | 20495.2 |
| porin | BK654_28995 | Not Available | Negative | 6666080 - 6667642 | 57185.3 |
| abc transporter substrate-binding protein | BK654_29000 | Not Available | Positive | 6667811 - 6669085 | 46342.0 |
| abc transporter permease | BK654_29005 | Not Available | Positive | 6669107 - 6670069 | 35560.3 |
| sugar abc transporter permease | BK654_29010 | Not Available | Positive | 6670066 - 6670908 | 30621.6 |
| abc transporter | BK654_29015 | Not Available | Positive | 6670936 - 6672072 | 41246.2 |
| glycosyl hydrolase family 32 | BK654_29020 | Not Available | Positive | 6672069 - 6673571 | 56241.5 |
| transcriptional regulator | BK654_29025 | Not Available | Positive | 6673647 - 6674639 | 36405.1 |
| toxin | BK654_29040 | Not Available | Negative | 6680641 - 6684975 | 162911.0 |
| hypothetical protein | BK654_29045 | Not Available | Negative | 6685146 - 6685553 | 14786.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
