Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | BK654_28940 | Not Available | Positive | 6653610 - 6654434 | 28651.9 |
| hypothetical protein | BK654_28945 | Not Available | Positive | 6654745 - 6655752 | 37037.9 |
| hypothetical protein | BK654_28950 | Not Available | Positive | 6655798 - 6656604 | 29963.8 |
| xylose isomerase | BK654_28955 | Not Available | Negative | 6656708 - 6657517 | 29457.2 |
| short-chain dehydrogenase | BK654_28960 | Not Available | Positive | 6657799 - 6658590 | 27180.7 |
| hypothetical protein | BK654_28965 | Not Available | Positive | 6658791 - 6659231 | 15916.4 |
| hypothetical protein | BK654_28970 | Not Available | Positive | 6659263 - 6662187 | 109753.0 |
| nadph:quinone oxidoreductase | BK654_28975 | Not Available | Negative | 6662260 - 6663255 | 35655.3 |
| oxidoreductase | BK654_28980 | Not Available | Negative | 6663332 - 6664318 | 34466.4 |
| sdr family oxidoreductase | BK654_28985 | Not Available | Negative | 6664504 - 6665289 | 27849.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
