Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription factor | BK654_28875 | Not Available | Negative | 6635846 - 6636850 | 37925.3 |
| hypothetical protein | BK654_28895 | Not Available | Negative | 6642619 - 6643314 | 25503.2 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | BK654_28900 | Not Available | Negative | 6643337 - 6644230 | 31796.2 |
| 2-keto-4-pentenoate hydratase | BK654_28905 | Not Available | Negative | 6644234 - 6645034 | 27806.4 |
| iclr family transcriptional regulator | BK654_28910 | Not Available | Negative | 6645031 - 6645837 | 29008.3 |
| fumarylacetoacetate hydrolase | BK654_28915 | Not Available | Negative | 6646115 - 6647293 | 41908.1 |
| lysr family transcriptional regulator | BK654_28920 | Not Available | Positive | 6647414 - 6648400 | 37540.6 |
| galactonate dehydratase | BK654_28925 | Not Available | Positive | 6648524 - 6650071 | 54567.0 |
| aldehyde dehydrogenase (nadp(+)) | BK654_28930 | Not Available | Positive | 6650132 - 6651712 | 55609.7 |
| mfs transporter | BK654_28935 | Not Available | Positive | 6652018 - 6653460 | 51843.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
