Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK654_28770 | Not Available | Negative | 6579914 - 6580678 | 26163.4 |
| lysr family transcriptional regulator | BK654_28775 | Not Available | Positive | 6580884 - 6581765 | 31649.2 |
| cupin | BK654_28780 | Not Available | Positive | 6581864 - 6582208 | 13127.8 |
| 3-hydroxyisobutyrate dehydrogenase | BK654_28785 | Not Available | Negative | 6582427 - 6583314 | 29787.9 |
| methylmalonate-semialdehyde dehydrogenase (acylating) | BK654_28790 | Not Available | Negative | 6583325 - 6584851 | 54040.3 |
| lysr family transcriptional regulator | BK654_28795 | Not Available | Positive | 6584990 - 6585937 | 35378.7 |
| hypothetical protein | BK654_28800 | Not Available | Negative | 6585934 - 6586437 | 17819.4 |
| diguanylate cyclase | BK654_28805 | Not Available | Negative | 6586459 - 6587709 | 44656.8 |
| hypothetical protein | BK654_28810 | Not Available | Negative | 6587706 - 6588281 | 20722.9 |
| exodeoxyribonuclease v subunit alpha | BK654_28815 | Not Available | Negative | 6588421 - 6590511 | 76690.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
