Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin | BK654_28720 | Not Available | Positive | 6567837 - 6570626 | 104045.0 |
| bleomycin resistance family protein | BK654_28725 | Not Available | Negative | 6570633 - 6571001 | 13792.4 |
| d-aminoacylase | BK654_28730 | Not Available | Negative | 6571136 - 6572608 | 52695.5 |
| rpir family transcriptional regulator | BK654_28735 | Not Available | Negative | 6572610 - 6573470 | 31008.3 |
| permease dsdx | BK654_28740 | Not Available | Negative | 6573498 - 6574847 | 47385.8 |
| sodium-independent anion transporter | BK654_28745 | Not Available | Positive | 6575247 - 6576692 | 51591.9 |
| epimerase | BK654_28750 | Not Available | Negative | 6576837 - 6577730 | 31602.6 |
| lysr family transcriptional regulator | BK654_28755 | Not Available | Negative | 6577833 - 6578744 | 33700.4 |
| nadph quinone reductase mdab | BK654_28760 | Not Available | Negative | 6578821 - 6579411 | 22021.1 |
| antibiotic biosynthesis monooxygenase | BK654_28765 | Not Available | Positive | 6579610 - 6579924 | 12378.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
