Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shlb family hemolysin secretion/activation protein | BK654_28670 | Not Available | Negative | 6546517 - 6548223 | 63269.6 |
| hypothetical protein | BK654_28675 | Not Available | Negative | 6548516 - 6549106 | 21517.0 |
| catalase/peroxidase hpi | BK654_28680 | Not Available | Positive | 6549475 - 6551739 | 82566.8 |
| phosphatidic acid phosphatase | BK654_28685 | Not Available | Negative | 6551891 - 6552739 | 32386.8 |
| histidine phosphatase family protein | BK654_28690 | Not Available | Negative | 6552764 - 6553435 | 24386.5 |
| methyl-accepting chemotaxis protein | BK654_28695 | Not Available | Positive | 6553699 - 6555618 | 68840.9 |
| plasmid stabilization protein | BK654_28700 | Not Available | Negative | 6555742 - 6555969 | 8277.93 |
| toxin | BK654_28705 | Not Available | Positive | 6556210 - 6558741 | 93090.7 |
| toxin | BK654_28710 | Not Available | Positive | 6558776 - 6563368 | 172400.0 |
| toxin | BK654_28715 | Not Available | Positive | 6563365 - 6567840 | 167645.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
