Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iv | BK654_28350 | Not Available | Negative | 6483479 - 6484540 | 39356.2 |
| Trna-met | Not Available | Not Available | Positive | 6484823 - 6484899 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 6485120 - 6485196 | Not Available |
| hypothetical protein | BK654_28365 | Not Available | Positive | 6485348 - 6487990 | 96729.8 |
| virulence factor family protein | BK654_28370 | Not Available | Positive | 6487990 - 6489279 | 46906.8 |
| potassium transporter kup | BK654_28375 | Not Available | Negative | 6489540 - 6491441 | 68485.1 |
| ribosomal protein s12 methylthiotransferase | BK654_28380 | Not Available | Positive | 6491716 - 6493056 | 49579.3 |
| gnat family n-acetyltransferase | BK654_28385 | Not Available | Positive | 6493178 - 6493651 | 18070.8 |
| rna-binding protein | BK654_28390 | Not Available | Positive | 6493734 - 6494444 | 26127.8 |
| hypothetical protein | BK654_28395 | Not Available | Positive | 6494502 - 6494963 | 17409.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
