Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc chelation protein secc | BK654_28250 | Not Available | Positive | 6461574 - 6461783 | 7694.78 |
| cysteine hydrolase | BK654_28255 | Not Available | Negative | 6461935 - 6462498 | 20600.4 |
| penicillin acylase family protein | BK654_28260 | Not Available | Positive | 6462698 - 6465148 | 89126.7 |
| dna ligase-associated dexh box helicase | BK654_28265 | Not Available | Positive | 6465391 - 6466422 | 37840.5 |
| atp-dependent dna ligase | BK654_28270 | Not Available | Positive | 6466419 - 6468107 | 62945.5 |
| abc transporter substrate-binding protein | BK654_28275 | Not Available | Positive | 6468390 - 6469172 | 27906.4 |
| amino acid abc transporter permease | BK654_28280 | Not Available | Positive | 6469230 - 6469958 | 26921.7 |
| amino acid abc transporter permease | BK654_28285 | Not Available | Positive | 6469955 - 6470665 | 26535.7 |
| succinylglutamate desuccinylase | BK654_28290 | Not Available | Positive | 6470692 - 6471810 | 40982.2 |
| histidine/lysine/arginine/ornithine abc transporter atp-binding protein | BK654_28295 | Not Available | Positive | 6471824 - 6472588 | 28242.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
