Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK654_28150 | Not Available | Negative | 6442518 - 6443432 | 34296.3 |
| short chain dehydrogenase | BK654_28155 | Not Available | Positive | 6443537 - 6444136 | 21076.4 |
| hypothetical protein | BK654_28160 | Not Available | Positive | 6444197 - 6444868 | 24135.6 |
| hypothetical protein | BK654_28165 | Not Available | Positive | 6444942 - 6446555 | 58447.2 |
| cysteine synthase | BK654_28170 | Not Available | Negative | 6446723 - 6447817 | 40096.7 |
| na(+)/h(+) antiporter nhaa | BK654_28175 | Not Available | Positive | 6448084 - 6449271 | 41143.0 |
| hypothetical protein | BK654_28180 | Not Available | Negative | 6450135 - 6450599 | 15885.1 |
| 30s ribosomal protein s3 | BK654_28185 | Not Available | Positive | 6450769 - 6451053 | 10762.9 |
| pyridoxamine 5'-phosphate oxidase | BK654_28190 | Not Available | Negative | 6451001 - 6451648 | 24493.9 |
| hypothetical protein | BK654_28195 | Not Available | Negative | 6451673 - 6452785 | 38907.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
