Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK654_28095 | Not Available | Positive | 6431475 - 6433652 | 82011.3 |
| hypothetical protein | BK654_28100 | Not Available | Negative | 6433943 - 6434248 | 11162.3 |
| leucine abc transporter subunit substrate-binding protein livk | BK654_28105 | Not Available | Positive | 6434589 - 6435716 | 39648.3 |
| branched-chain amino acid abc transporter permease livh | BK654_28110 | Not Available | Positive | 6435946 - 6436869 | 32334.6 |
| high-affinity branched-chain amino acid abc transporter permease livm | BK654_28115 | Not Available | Positive | 6436866 - 6438122 | 45572.6 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livg | BK654_28120 | Not Available | Positive | 6438119 - 6438886 | 28419.8 |
| abc transporter atp-binding protein | BK654_28125 | Not Available | Positive | 6438887 - 6439588 | 25615.3 |
| hypothetical protein | BK654_28135 | Not Available | Positive | 6440272 - 6441141 | 32051.1 |
| duf2063 domain-containing protein | BK654_28140 | Not Available | Positive | 6441138 - 6441908 | 27560.0 |
| hypothetical protein | BK654_28145 | Not Available | Positive | 6441905 - 6442384 | 17525.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
