Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine-ornithine antiporter | BK654_28045 | Not Available | Negative | 6418168 - 6419595 | 50794.4 |
| arginine-ornithine antiporter | BK654_28050 | Not Available | Positive | 6419979 - 6421406 | 51113.9 |
| arginine deiminase | BK654_28055 | Not Available | Positive | 6421438 - 6422694 | 46292.4 |
| ornithine carbamoyltransferase | BK654_28060 | Not Available | Positive | 6422766 - 6423776 | 37832.3 |
| carbamate kinase | BK654_28065 | Not Available | Positive | 6423941 - 6424870 | 32752.5 |
| duf5064 domain-containing protein | BK654_28070 | Not Available | Positive | 6424935 - 6425294 | 13728.2 |
| arac family transcriptional regulator | BK654_28075 | Not Available | Negative | 6425715 - 6426608 | 34004.9 |
| 4-hydroxybenzoate 3-monooxygenase | BK654_28080 | Not Available | Positive | 6426784 - 6427974 | 44599.4 |
| mfs transporter | BK654_28085 | Not Available | Positive | 6428044 - 6429561 | 53669.7 |
| mfs transporter | BK654_28090 | Not Available | Negative | 6429765 - 6431114 | 48645.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
