Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | BK654_27995 | Not Available | Negative | 6406116 - 6406847 | 27313.7 |
| glucokinase | BK654_28000 | Not Available | Negative | 6407032 - 6407991 | 33692.6 |
| phosphogluconate dehydratase | BK654_28005 | Not Available | Negative | 6407988 - 6409814 | 65268.7 |
| type i glyceraldehyde-3-phosphate dehydrogenase | BK654_28010 | Not Available | Positive | 6410033 - 6411034 | 36262.2 |
| rna polymerase subunit sigma-24 | BK654_28015 | Not Available | Positive | 6411240 - 6411749 | 19412.5 |
| glycerol-3-phosphate abc transporter substrate-binding protein | BK654_28020 | Not Available | Positive | 6411844 - 6412806 | 35540.9 |
| tonb-dependent receptor | BK654_28025 | Not Available | Positive | 6412927 - 6415521 | 94214.6 |
| biliverdin-producing heme oxygenase | BK654_28030 | Not Available | Positive | 6415577 - 6416167 | 21371.3 |
| hypothetical protein | BK654_28035 | Not Available | Positive | 6416303 - 6416743 | 16175.2 |
| acyl-coa transferase | BK654_28040 | Not Available | Positive | 6416778 - 6418124 | 48373.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
