Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase | BK654_27795 | Not Available | Positive | 6365809 - 6367152 | 47020.8 |
| rna polymerase subunit sigma-24 | BK654_27800 | Not Available | Negative | 6367327 - 6368562 | 46114.7 |
| polyketide cyclase | BK654_27805 | Not Available | Negative | 6368562 - 6369038 | 17974.5 |
| dehydrogenase | BK654_27810 | Not Available | Negative | 6369066 - 6369410 | 12313.7 |
| duf4440 domain-containing protein | BK654_27815 | Not Available | Negative | 6369478 - 6369912 | 16400.5 |
| gnat family n-acetyltransferase | BK654_27820 | Not Available | Positive | 6370055 - 6370540 | 17567.3 |
| arac family transcriptional regulator | BK654_27825 | Not Available | Negative | 6370676 - 6371164 | 18683.8 |
| lysine transporter lyse | BK654_27830 | Not Available | Negative | 6371243 - 6371905 | 23037.6 |
| alanine transaminase | BK654_27835 | Not Available | Positive | 6372115 - 6373332 | 45101.5 |
| permease dsdx | BK654_27840 | Not Available | Negative | 6373500 - 6374852 | 47227.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
